Dataset Identification:

Resource Abstract:
mentha archives evidence collected from different sources and presents these data in a complete and comprehensive way. Its data comes from manually curated protein-protein interaction databases that have adhered to the IMEx consortium. The aggregated data forms an interactome which includes many organisms. mentha is a resource that offers a series of tools to analyse selected proteins in the context of a network of interactions. Protein interaction databases archive protein-protein interaction (PPI) information from published articles. However, no database alone has sufficient literature coverage to offer a complete resource to investigate "the interactome". mentha's approach generates every week a consistent interactome (graph). Most importantly, the procedure assigns to each interaction a reliability score that takes into account all the supporting evidence. mentha offers eight interactomes (Homo sapiens, Arabidopsis thaliana, Caenorhabditis elegans, Drosophila melanogaster, Escherichia coli K12, Mus musculus, Rattus norvegicus, Saccharomyces cerevisiae) plus a global network that comprises every organism, including those not mentioned. The website and the graphical application are designed to make the data stored in mentha accessible and analysable to all users. Source databases are: MINT, IntAct, DIP, MatrixDB and BioGRID.
Citation
Title mentha
publication  Date   2013
Theme keywords (theme):
201 Basic Biological and Medical Research
20103 Cell Biology
20105 General Genetics
21 Biology
2 Life Sciences
thesaurus name >
Title DFG
Location keywords:
transcripts
human
plants
animals
microbes
Theme keywords (theme):
closed
thesaurus name >
Title re3 Deposit
publication  Date   2015-01-01
Theme keywords (theme):
thesaurus name >
Title Material > Chemical
publication  Date   2017-03-28
other Citation Details  Cinergi keyword enhanced.File generated at Tue Mar 28 20:05:08 UTC 2017
Theme keywords (theme):
thesaurus name >
Title Material > Biological Material
publication  Date   2017-03-28
other Citation Details  Cinergi keyword enhanced.File generated at Tue Mar 28 20:05:08 UTC 2017
Theme keywords (theme):
thesaurus name >
Title Science Domain > Biology
publication  Date   2017-03-28
other Citation Details  Cinergi keyword enhanced.File generated at Tue Mar 28 20:05:08 UTC 2017
Theme keywords (theme):
thesaurus name >
Title Resource Type > Software
publication  Date   2017-03-28
other Citation Details  Cinergi keyword enhanced.File generated at Tue Mar 28 20:05:08 UTC 2017
Theme keywords (theme):
thesaurus name >
Title Virtual International Authority File (VIAF) Corporate Names
publication  Date   2017-03-28
other Citation Details  Cinergi keyword enhanced.File generated at Tue Mar 28 20:05:08 UTC 2017
Resource language:  true
Constraints on resource usage:
Constraints
Use limitation statement:
Disclaimer - While every effort has been made to ensure that these data are accurate and reliable within the limits of the current state of the art, NOAA cannot assume liability for any damages caused by any errors or omissions in the data, nor as a result of the failure of the data to function on a particular system. NOAA makes no warranty, expressed or implied, nor does the fact of distribution constitute such a warranty.
Constraints on resource usage:
Legal Constraints
Access Constraints  otherRestrictions
use constraint:  otherRestrictions
Other constraints
WMO Essential
Additional information on resource:
point of contact - custodian
organisation Name  University of Tor Vergata, Department of Biology, Molecular Genetics Group
point of contact - custodian
organisation Name  International Molecular Exchange Consortium
point of contact - custodian
organisation Name  European Commission, Community Research and Development Information Service, Seventh Framework Programme
point of contact - custodian
organisation Name  Fondo per gli Investimenti della Ricerca di Base
point of contact - custodian
organisation Name  HUPO Proteomics Standards Initiative
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Resource distribution information

Format
Format name Resource URL
Format version
Format
Format name API
Format version
Digital Transfer Options
Linkage for online resource
name Repository URL
URL:http://mentha.uniroma2.it/
link function information
Digital Transfer Options
Linkage for online resource
name API
URL:
link function download
Metadata data stamp:
Metadata contact - pointOfContact
organisation Name  Earthcube CINERGI Metadata Pipeline
position Name CINERGI Metadata Contact
Contact information
Address
electronic Mail Addressmetadata@earthcube.org
Metadata scope code  service
Metadata language  en
standard version:  2003
Metadata record identifier:  r3d100011124
URI for dataset described: > http://mentha.uniroma2.it/

Metadata record format is ISO19139-2 XML (MI_Metadata)